TPIA : Tea Plant Information Archive

TPGD : Tea Plant Genome Database

TeaMiD : Tea Microsatellite Database

TeaAS : Database for Alternative Splicing in Tea Plant

TeaCoN : Tea Plant Gene Co-expression Network Database

Chen J-D, He W-Z, Chen S, Chen Q-Y, Ma J-Q, Jin J-Q, Ma C-L, Moon D-G, Ercisli S, Yao M-Z and Chen L (2022) TeaGVD: A comprehensive database of genomic variations for uncovering the genetic architecture of metabolic traits in tea plants. Front. Plant Sci. 13:1056891. doi: 10.3389/fpls.2022.1056891

E-mail: chenjd@tricaas.com

Address: Tea Research Institute, Chinese Academy of Agricultural Sciences (TRICAAS), No. 9 South Meiling Road, Hangzhou, Zhejiang 310008, China

WeChat ID: TeaGermplasmLab

2022-06-18

Data update: The SNPs and InDels of 415 GBS Germplasms (doi: 10.7717/peerj.8572) have been loaded into database.

2022-04-21

Tools update: The submodule Candidate Region and Lead SNP Genotype have been updated. Users can explore candidate genes and functional markers associated with the metabolite by Candidate Region and Lead SNP Genotype.

2022-02-19

Data update: The SNPs and InDels of 246 WGS Germplasms (doi: 10.1038/s41588-021-00895-y, 10.1038/s41438-021-00617-9) have been loaded into database.

2021-08-05

Tools update: The module Phenotype has been updated. Users can search phenotype and GWAS information of metabolic traits.

2021-06-22

Data update: The SNPs and InDels of 353 RNA-seq Germplasms (doi: 10.1038/s41467-020-17498-6, 10.1038/s41467-020-19441-1) have been loaded into database.

2021-03-01

Tools update: A Population Genetic Analysis tool is available. Users can calculate the SNP density, Pi, Tajimi'D of genomic regions.

2020-12-05

TeaGVD, a user-friendly and comprehensive database for tea plant genomic variation, has been released! It integrates >70,000,000 genomic variations from genome-wide resequencing data of 219 tea germplasms.